Welcome to TiddlyWiki created by Jeremy Ruston, Copyright © 2007 UnaMesa Association
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<!--{{{-->
<!-- Original Toolbar div class='toolbar' macro='toolbar [[ToolbarCommands::EditToolbar]]'></div -->
<!-- Modified Toolbar -->
<div class='toolbar' macro="showWhen readOnly">
<!-- cut-down toolbar for web users -->
<div class='toolbar' macro='toolbar closeTiddler permalink'></div>
</div>
<div class='toolbar' macro="hideWhen readOnly">
<!-- regular toolbar for me -->
<div class='toolbar' macro='toolbar [[ToolbarCommands::EditToolbar]]'></div>
</div>
<!-- Modified Toolbar -->
<div class='title' macro='view title'></div>
<div class='editor' macro='edit title'></div>
<div macro='annotations'></div>
<div class='editor' macro='edit text'></div>
<div class='editor' macro='edit tags'></div><div class='editorFooter'><span macro='message views.editor.tagPrompt'></span><span macro='tagChooser excludeLists'></span></div>
<!--}}}-->
To get started with this blank [[TiddlyWiki]], you'll need to modify the following tiddlers:
* [[SiteTitle]] & [[SiteSubtitle]]: The title and subtitle of the site, as shown above (after saving, they will also appear in the browser title bar)
* [[MainMenu]]: The menu (usually on the left)
* [[DefaultTiddlers]]: Contains the names of the tiddlers that you want to appear when the TiddlyWiki is opened
You'll also need to enter your username for signing your edits: <<option txtUserName>>
/***
|Name:|HideWhenPlugin|
|Description:|Allows conditional inclusion/exclusion in templates|
|Version:|3.1 ($Rev: 3919 $)|
|Date:|$Date: 2008-03-13 02:03:12 +1000 (Thu, 13 Mar 2008) $|
|Source:|http://mptw.tiddlyspot.com/#HideWhenPlugin|
|Author:|Simon Baird <simon.baird@gmail.com>|
|License:|http://mptw.tiddlyspot.com/#TheBSDLicense|
For use in ViewTemplate and EditTemplate. Example usage:
{{{<div macro="showWhenTagged Task">[[TaskToolbar]]</div>}}}
{{{<div macro="showWhen tiddler.modifier == 'BartSimpson'"><img src="bart.gif"/></div>}}}
***/
//{{{
window.hideWhenLastTest = false;
window.removeElementWhen = function(test,place) {
window.hideWhenLastTest = test;
if (test) {
removeChildren(place);
place.parentNode.removeChild(place);
}
};
merge(config.macros,{
hideWhen: { handler: function(place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( eval(paramString), place);
}},
showWhen: { handler: function(place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( !eval(paramString), place);
}},
hideWhenTagged: { handler: function (place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( tiddler.tags.containsAll(params), place);
}},
showWhenTagged: { handler: function (place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( !tiddler.tags.containsAll(params), place);
}},
hideWhenTaggedAny: { handler: function (place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( tiddler.tags.containsAny(params), place);
}},
showWhenTaggedAny: { handler: function (place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( !tiddler.tags.containsAny(params), place);
}},
hideWhenTaggedAll: { handler: function (place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( tiddler.tags.containsAll(params), place);
}},
showWhenTaggedAll: { handler: function (place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( !tiddler.tags.containsAll(params), place);
}},
hideWhenExists: { handler: function(place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( store.tiddlerExists(params[0]) || store.isShadowTiddler(params[0]), place);
}},
showWhenExists: { handler: function(place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( !(store.tiddlerExists(params[0]) || store.isShadowTiddler(params[0])), place);
}},
hideWhenTitleIs: { handler: function(place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( tiddler.title == params[0], place);
}},
showWhenTitleIs: { handler: function(place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( tiddler.title != params[0], place);
}},
'else': { handler: function(place,macroName,params,wikifier,paramString,tiddler) {
removeElementWhen( !window.hideWhenLastTest, place);
}}
});
//}}}
/***
|Name|InlineJavascriptPlugin|
|Source|http://www.TiddlyTools.com/#InlineJavascriptPlugin|
|Documentation|http://www.TiddlyTools.com/#InlineJavascriptPluginInfo|
|Version|1.9.5|
|Author|Eric Shulman|
|License|http://www.TiddlyTools.com/#LegalStatements|
|~CoreVersion|2.1|
|Type|plugin|
|Description|Insert Javascript executable code directly into your tiddler content.|
''Call directly into TW core utility routines, define new functions, calculate values, add dynamically-generated TiddlyWiki-formatted output'' into tiddler content, or perform any other programmatic actions each time the tiddler is rendered.
!!!!!Documentation
>see [[InlineJavascriptPluginInfo]]
!!!!!Revisions
<<<
2009.04.11 [1.9.5] pass current tiddler object into wrapper code so it can be referenced from within 'onclick' scripts
2009.02.26 [1.9.4] in $(), handle leading '#' on ID for compatibility with JQuery syntax
|please see [[InlineJavascriptPluginInfo]] for additional revision details|
2005.11.08 [1.0.0] initial release
<<<
!!!!!Code
***/
//{{{
version.extensions.InlineJavascriptPlugin= {major: 1, minor: 9, revision: 5, date: new Date(2009,4,11)};
config.formatters.push( {
name: "inlineJavascript",
match: "\\<script",
lookahead: "\\<script(?: src=\\\"((?:.|\\n)*?)\\\")?(?: label=\\\"((?:.|\\n)*?)\\\")?(?: title=\\\"((?:.|\\n)*?)\\\")?(?: key=\\\"((?:.|\\n)*?)\\\")?( show)?\\>((?:.|\\n)*?)\\</script\\>",
handler: function(w) {
var lookaheadRegExp = new RegExp(this.lookahead,"mg");
lookaheadRegExp.lastIndex = w.matchStart;
var lookaheadMatch = lookaheadRegExp.exec(w.source)
if(lookaheadMatch && lookaheadMatch.index == w.matchStart) {
var src=lookaheadMatch[1];
var label=lookaheadMatch[2];
var tip=lookaheadMatch[3];
var key=lookaheadMatch[4];
var show=lookaheadMatch[5];
var code=lookaheadMatch[6];
if (src) { // external script library
var script = document.createElement("script"); script.src = src;
document.body.appendChild(script); document.body.removeChild(script);
}
if (code) { // inline code
if (show) // display source in tiddler
wikify("{{{\n"+lookaheadMatch[0]+"\n}}}\n",w.output);
if (label) { // create 'onclick' command link
var link=createTiddlyElement(w.output,"a",null,"tiddlyLinkExisting",wikifyPlainText(label));
var fixup=code.replace(/document.write\s*\(/gi,'place.bufferedHTML+=(');
link.code="function _out(place,tiddler){"+fixup+"\n};_out(this,this.tiddler);"
link.tiddler=w.tiddler;
link.onclick=function(){
this.bufferedHTML="";
try{ var r=eval(this.code);
if(this.bufferedHTML.length || (typeof(r)==="string")&&r.length)
var s=this.parentNode.insertBefore(document.createElement("span"),this.nextSibling);
if(this.bufferedHTML.length)
s.innerHTML=this.bufferedHTML;
if((typeof(r)==="string")&&r.length) {
wikify(r,s,null,this.tiddler);
return false;
} else return r!==undefined?r:false;
} catch(e){alert(e.description||e.toString());return false;}
};
link.setAttribute("title",tip||"");
var URIcode='javascript:void(eval(decodeURIComponent(%22(function(){try{';
URIcode+=encodeURIComponent(encodeURIComponent(code.replace(/\n/g,' ')));
URIcode+='}catch(e){alert(e.description||e.toString())}})()%22)))';
link.setAttribute("href",URIcode);
link.style.cursor="pointer";
if (key) link.accessKey=key.substr(0,1); // single character only
}
else { // run script immediately
var fixup=code.replace(/document.write\s*\(/gi,'place.innerHTML+=(');
var c="function _out(place,tiddler){"+fixup+"\n};_out(w.output,w.tiddler);";
try { var out=eval(c); }
catch(e) { out=e.description?e.description:e.toString(); }
if (out && out.length) wikify(out,w.output,w.highlightRegExp,w.tiddler);
}
}
w.nextMatch = lookaheadMatch.index + lookaheadMatch[0].length;
}
}
} )
//}}}
// // Backward-compatibility for TW2.1.x and earlier
//{{{
if (typeof(wikifyPlainText)=="undefined") window.wikifyPlainText=function(text,limit,tiddler) {
if(limit > 0) text = text.substr(0,limit);
var wikifier = new Wikifier(text,formatter,null,tiddler);
return wikifier.wikifyPlain();
}
//}}}
// // GLOBAL FUNCTION: $(...) -- 'shorthand' convenience syntax for document.getElementById()
//{{{
if (typeof($)=='undefined') { function $(id) { return document.getElementById(id.replace(/^#/,'')); } }
//}}}
!!Research Interests
*Marine, estuarine and freshwater plankton ecology and taxonomy
*Biological Production and Biogeochemical Cycles
*Biological and Chemical Oceanography and Limnology
*Ecotoxicology, Environmental Pollution and Water Quality
*Environmental Management and Impact Assessment
*Aquaculture life feed production; Aquaculture sustainability and environmental impacts
*Climate change, Biodiversity and Conservation
!!Education
*"""PhD""" in Marine Biology and Aquaculture – [[James Cook University|http://www.jcu.edu.au]] and [[Australian Institute of Marine Science|http://www.aims.gov.au]]
*"""MSc""" in Environmental Engineering – [[University of São Paulo|http://www.usp.br]], [[São Carlos School of Engineering|http://www.eesc.usp.br]], [[Department of Hydraulics and Sanitation|http://www.eesc.usp.br/shs/]]
*"""BSc""" (Honours) in Oceanology – [[Federal University of Rio Grande|http://www.furg.br]], [[Oceanography Department|http://www.oceanografia.furg.br/ccoceano/site/]]
!!Awards and Honours
*2009 - [[David Cushing Prize|http://dx.doi.org/10.1093/plankt/fbp130]] (Journal of Plankton Research)
*2009 - [[Peter Holloway Oceanography Award|http://amsa.asn.au/students/confprizes.php]] (AMSA)
*1998 - Young Researcher Award (Brazil)
!!Professional Associations
*[[World Association of Copepodologists (WAC)|http://www.monoculus.org]]
*[[Australian Marine Sciences Association (AMSA)|http://www.amsa.asn.au]]
*[[Society of Environmental Toxicology and Chemistry (SETAC)|http://www.setac.org]]
!!Publications & Presentations
Find my full list of peer reviewed publications, dissertations and talks [[here|Publications %26 Presentations]]. Reprints are available [[upon request|Contact]]
[[Introduction]]
[[Publications|Publications %26 Presentations]]
[[Contact]]
[[Useful Links]]
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try {
var pageTracker = _gat._getTracker("UA-532804-7");
pageTracker._trackPageview();
} catch(err) {}</script>
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<!--{{{-->
<link rel='alternate' type='application/rss+xml' title='RSS' href='index.xml' />
<!--}}}-->
These [[InterfaceOptions]] for customising [[TiddlyWiki]] are saved in your browser
Your username for signing your edits. Write it as a [[WikiWord]] (eg [[JoeBloggs]])
<<option txtUserName>>
<<option chkSaveBackups>> [[SaveBackups]]
<<option chkAutoSave>> [[AutoSave]]
<<option chkRegExpSearch>> [[RegExpSearch]]
<<option chkCaseSensitiveSearch>> [[CaseSensitiveSearch]]
<<option chkAnimate>> [[EnableAnimations]]
----
Also see [[AdvancedOptions]]
<!--{{{-->
<!-- Original div class='header' macro='gradient vert [[ColorPalette::PrimaryLight]] [[ColorPalette::PrimaryMid]]' -->
<div class='header'>
<div class='headerShadow'>
<span class='siteTitle' refresh='content' tiddler='SiteTitle'></span></br>
<span class='siteSubtitle' refresh='content' tiddler='SiteSubtitle'></span>
</div>
<div class='headerForeground'>
<span class='siteTitle' refresh='content' tiddler='SiteTitle'></span></br>
<span class='siteSubtitle' refresh='content' tiddler='SiteSubtitle'></span>
</div>
</div>
<div id='mainMenu' refresh='content' tiddler='MainMenu'></div>
<div id='sidebar'>
<div id='sidebarOptions' refresh='content' tiddler='SideBarOptions'></div>
<div id='sidebarTabs' refresh='content' force='true' tiddler='SideBarTabs'></div>
</div>
<div id='displayArea'>
<div id='messageArea'></div>
<div id='tiddlerDisplay'></div>
</div>
<!--}}}-->
Reprints are available [[upon request|Contact]].
!!Peer Reviewed Articles
* Gusmão, L.F.M. & """McKinnon""", A.D. 2011. ''Nucleic acid indices of egg production in the tropical copepod Acartia sinjiensis''. Journal of Experimental Marine Biology and Ecology, 396(2):122-137. http://dx.doi.org/10.1016/j.jembe.2010.10.008
* Gusmão, L.F.M. & """McKinnon""", A.D. 2009. Sex ratios, intersexuality and sex change in copepods. Journal of Plankton Research, 31(9):1101-1117. http://dx.doi.org/10.1093/plankt/fbp059
* Gusmão, L.F.M. & """McKinnon""", A.D. 2009. Acrocalanus gracilis development and secondary production in the Timor Sea. Journal of Plankton Research, 31(9):1089-1100. http://dx.doi.org/10.1093/plankt/fbp047
* Gusmão, L.F.M. & """McKinnon""", A.D. 2009. The effect of food type and quantity on egg production and nucleic acid content of Acartia sinjiensis. Aquaculture, 296:71-80. http://dx.doi.org/10.1016/j.aquaculture.2009.08.015
*Gama, A.M. S., Montú, M.A. & Gusmão, L.F.M. 2002. Post-marsupial life cycle and growth of Metamysidopsis elongata atlantica (Crustacea, Mysidacea, Mysidae) in laboratory. Iheringia, Sér. Zool. 92(1):77-83. http://dx.doi.org/10.1590/S0073-47212002000100006*
!!Book Chapters
*Gusmão, L.F.M.; Motheo, D.F. ; Pereira, D.F. ; Espíndola, E.L.G. 2005. Preliminary characterization of the zooplankton community of the lake system of the University of Sao Paulo Pirassununga Campus. In: E. Wendland & V. Schalch. (Ed.). Environmental Engineering Series, Volume 3. Rima*
*Masutti, M.B. ; Espíndola, E.L.G. ; Gusmão, L.F.M.; Queiróz, L.A. 2005. Effects of Chromium and Copper on the Phytoplankton (Chlorophyll and Primary Production) in the Lobo Reservoir (Itirapina - Brotas, SP): A Mesocosms Experiment. In: E. Wendland & V. Schalch. (Org.). Environmental Engineering Series, Volume 3. Rima*
!!Notes in Conference Proceedings
*Gusmão, L.F.M. & Montú, M.A. 2001. Ocurrence of Metamysidopsis macaensis (Crustacea: Mysidacea) in the south of Brazil. Proceedings of the XIV National Week of Oceanography.*
*Gusmão, L.F.M. & Montú, M.A. & Gama, A.M.S. 1999. Seasonal variation of Average lengths and biomass of Metamysidopsis elongata (Crustacea: mysidacea) in the surf zone of the Cassino beach (Brazil - RS). Proceedings of the XII National Week of Oceanography. p. 165-167*
*Gusmão, L.F.M., Montú, M.A. & Gama, A.M.S. 1998. Average lengths and biomass of Metamysidopsis elongata (Crustacea: Mysidacea) in the field and culture in laboratory. Preliminary results. Proceedings of the XI National Week of Oceanography. p. 174-176*
!!Thesis and Dissertations
*Gusmão, L.F.M. 2010. [[Controls on development and nucleic acid indices in tropical planktonic copepods|http://eprints.jcu.edu.au/12072/]]. """PhD""" Thesis. James Cook University, Australia.
*Gusmão, L.F.M. 2004. [[Effects of copper and chromium in the zooplankton community: a mesocosms experiment|http://www.teses.usp.br/teses/disponiveis/18/18139/tde-14102004-165206/]]. """MSc""" Dissertation. University of São Paulo, São Carlos School of Engineering, Department of Hydraulics and Sanitation, Brazil.
*Gusmão, L.F.M. 2002. [[Seasonality and abundance of mysids in the estuarine and adjacent coastal areas of the Patos Lagoon|https://sites.google.com/a/gusmao.info/archives/Home/Gusmao_2002_Honors_Dissertation.pdf?attredirects=0]]. Federal University of Rio Grande, Oceanography Department, Brazil.
!!Conference Presentations
*Gusmão, L.F.M., J. Strzelecki & """McKinnon""", A.D. 2008. The use of """Aminoacyl-tRNA""" synthetases (AARS) activity as an index of mesozooplankton growth off Western Australian coast. AMSA Conference 2009, Adelaide, Autralia
*Gusmão, L.F.M. & """McKinnon""", A.D. 2008. Acrocalanus gracilis development and intersexuality in the Timor Sea. 10th International Conference on Copepoda, Pattaya, Thailand
*Gusmão, L.F.M., Espíndola, E.L.G., Masutti, M.B. & Reis Filho, R.W. 2008. Effects of copper and chromium contamination on the populational structure of four freshwater copepod species in micro and mesocosms experiments. 10th International Conference on Copepoda, Pattaya, Thailand
*Gusmão, L.F.M. & """McKinnon""", A.D. 2007. Mesozooplankton biomass and copepod growth rates in the Whitsunday islands, Great Barrier Reef, Australia. 4th International Zooplankton Symposium, Hyroshima, Japan
*Gusmão, L.F.M. & """McKinnon""", A.D. 2006. Copepod egg production and growth rates in the Timor Sea. AMSA Conference 2006, Cairns, Australia.
*Gusmão, L.F.M. & """McKinnon""", A.D. 2006. Controls on egg production and naupliar growth of Pseudodiaptomus australiensis (Copepoda : Calanoida). AMSA Conference 2006, Cairns, Australia.
*Gusmão, L.F.M., Espíndola, E.L.G., Masutti, M.B. & Reis Filho, R.W. 2004. The effect of sub-lethal concentrations of Copper and Chromium in the fecundity and number of eggs of Copepoda Calanoida in Mesocosms Experiments. VIII Brazilian Congress of Ecotoxicology. p. 59-60.*
*Gusmão, L.F.M., Espíndola, E.L.G., Masutti, M.B. & Reis Filho, R.W. 2004. Dynamics of Bosminidae (Cladocera: Crustacea) populations in response to the contamination of sub-lethal concentrations of copper and chromium in mesocosms experiments. In: VIII Brazilian Congress of Ecotoxicology. p. 60-60.*
*Gusmão, L.F.M., Espíndola, E.L.G., Masutti, M.B. & Reis Filho, R.W. 2004. The ratio of Copepoda Calanoida and Cyclopoida as an indicator of toxicity of sub-lethal concentrations of copper and chromium in mesocosms experiments. In: VIII Brazilian Congress of Ecotoxicology. p. 59-59.*
*Reis Filho, R.W. ; Rietzler, A. C. ; Masutti, M.B. & Gusmão, L.F.M. 2004. Application of the sediment quality triad in the ecotoxicological evaluation of the Lobo Reservoir in mesocosms experiments. In: VIII Brazilian Congress of Ecotoxicology. p. 41-42.*
*Gusmão, L.F.M., Masutti, M.B., Espíndola, E.L.G. 2003. Effects of copper and chromium in planktonic microcrustaceans in microcosms experiments. In: IX Brazilian Congress of Limnology.*
*Masutti, M.B., Simões, F.C.F., Nogueira, A.M., Gusmão, L.F.M. & Espíndola, E.L.G. 2003. Influence of Cu and Cr on the limnological parameters of reservoirs: a mesocosms experiment with two levels of complexity. In: IX Brazilian Congress of Limnology.*
*Gusmão, L.F.M., Masutti, M.B., Reis Filho, R.W. ; Espíndola, E.L.G. 2003. The use of mesocosms as a tool for the management of contamination in freshwater reservoirs. In: IX Environmental Engineering Symposium.*
*Reis Filho, R.W.; Gusmão, L.F.M., Minillo, A. 2003. The effect of sediment ressuspension of mesocosms contaminated with copper and chromium on the algae Selenastrum Capricornutum. In: IX Brazilian Congress of Limnology.*
*Masutti, M.B., Gusmão, L.F.M., Espíndola, E.L.G. & Reis Filho, R.W. 2003. Effects of the addition of heavy metals (Cu and Cr) on the limnological characteristics, chlorophyll concentration and zooplankton community of the Lobo Reservoir (Itirapina, SP. Brasil) in microcosms experiments. In: 5th Iberian and 2nd Iberoamerican Congress of Environmental Contamination and Toxicology, Cidade do Porto, Portugal
*Masutti, M.B., Espíndola, E.L.G., Gusmão, L.F.M., Campagna, A.F. 2003. Bioaccumulation of heavy metals (Cu and Cr) in the plankton of the Lobo Reservoir in mesocosms experiments. In: 5th Iberian and 2nd Iberoamerican Congress of Environmental Contamination and Toxicology, Cidade do Porto, Portugal
*Silva, T.S., Freitas, D.M. & Gusmão, L.F.M. 2003. Geographical Information Systems and Remote Sensing in Water Resources and Coastal Management. In: IX Environmental Engineering Symposium.*
*Gusmão, L.F.M. & Montú, M.A. 2002. Seasonality and Abundance of Metamysidopsis elongata atlantica in the estuarine and adjacent coastal areas of the Patos Lagoon. I Brazilian Oceanography Symposium.*
*Gusmão, L.F.M. & Miranda, V.F. de 2002. Chronic toxicity of zinc to Ceriodaphnia Silvestrii Daday. VII Brazilian Congress of Ecotoxicology and V """Latin-American""" """SETAC""" Meeting.*
*Gusmão, L.F.M. 2001. The popularization and growth of Oceanography in Brazil. 1st Congress of Environmental education in the "Inland Ocean" Area (Patos Lagoon).*
*Gusmão, L.F.M. & Montú, M.A. 2001. Some biological aspects of two Species of the genus Metamysidopsis (Crustacea: Mysidacea) of the Southern Coast of Brasil. XII Coloquio Argentino de Oceanografia and 2001 Joint Assemblies of the International Association for Physical Sciences of the Oceans and International Association for Biological Oceanography (IABO/IAPSO)
*Gusmão, L.F.M. & Montú, M.A. 2001. Seasonality and Abundance of mysids in the adjacent estuarine and coastal areas of the Patos Lagoon. V Congress of Ecology of Brazil.*
*Gusmão, L.F.M. & Montú, M.A. 2000. Relationship between lengths of mature females, number of embryo in the marsupium and frequency of occurrence of two species of the genus Metamysidopsis in the south of Brasil. XIII National Week of Oceanography.*
"""*"""in Portuguese
/***
|Name|SearchOptionsPlugin|
|Source|http://www.TiddlyTools.com/#SearchOptionsPlugin|
|Documentation|http://www.TiddlyTools.com/#SearchOptionsPluginInfo|
|Version|3.0.7|
|Author|Eric Shulman|
|License|http://www.TiddlyTools.com/#LegalStatements|
|~CoreVersion|2.1|
|Type|plugin|
|Description|extend core search function with additional user-configurable options|
Adds extra options to core search function including selecting which data items to search, enabling/disabling incremental key-by-key searches, and generating a ''list of matching tiddlers'' instead of immediately displaying all matches. This plugin also adds syntax for rendering 'search links' within tiddler content to embed one-click searches using pre-defined 'hard-coded' search terms.
!!!!!Documentation
>see [[SearchOptionsPluginInfo]]
!!!!!Configuration
<<<
Search in:
<<option chkSearchTitles>> titles <<option chkSearchText>> text <<option chkSearchTags>> tags <<option chkSearchFields>> fields <<option chkSearchShadows>> shadows
<<option chkSearchHighlight>> Highlight matching text in displayed tiddlers
<<option chkSearchList>> Show list of matches
<<option chkSearchListTiddler>> Write list to [[SearchResults]] tiddler
<<option chkSearchTitlesFirst>> Show title matches first
<<option chkSearchByDate>> Sort matching tiddlers by modification date (most recent first)
<<option chkSearchResultsOptions>> Include {{{options...}}} slider in "search again" form
<<option chkIncrementalSearch>> Incremental key-by-key search: {{twochar{<<option txtIncrementalSearchMin>>}}} or more characters, {{threechar{<<option txtIncrementalSearchDelay>>}}} msec delay
<<option chkSearchOpenTiddlers>> Search only in tiddlers that are currently displayed
<<option chkSearchExcludeTags>> Exclude tiddlers tagged with: <<option txtSearchExcludeTags>>
<<<
!!!!!Revisions
<<<
2010.05.03 3.0.8 added chkSearchResultsOptions to allow/omit the "options..." slider from the "search again" form
|please see [[SearchOptionsPluginInfo]] for additional revision details|
2005.10.18 1.0.0 Initial Release
<<<
!!!!!Code
***/
//{{{
version.extensions.SearchOptionsPlugin= {major: 3, minor: 0, revision: 8, date: new Date(2010,5,3)};
var defaults={
chkSearchTitles: true,
chkSearchText: true,
chkSearchTags: true,
chkSearchFields: true,
chkSearchTitlesFirst: true,
chkSearchList: true,
chkSearchHighlight: true,
chkSearchListTiddler: false,
chkSearchByDate: false,
chkIncrementalSearch: true,
chkSearchShadows: true,
chkSearchOpenTiddlers: false,
chkSearchResultsOptions:true,
chkSearchExcludeTags: true,
txtSearchExcludeTags: 'excludeSearch',
txtIncrementalSearchDelay: 500,
txtIncrementalSearchMin: 3
}; for (var id in defaults) if (config.options[id]===undefined)
config.options[id]=defaults[id];
if (config.macros.search.reportTitle==undefined)
config.macros.search.reportTitle="SearchResults"; // note: not a cookie!
config.macros.search.label+="\xa0"; // a little bit of space just because it looks better
//}}}
// // searchLink: {{{[search[text to find]] OR [search[text to display|text to find]]}}}
//{{{
config.formatters.push( {
name: "searchLink",
match: "\\[search\\[",
lookaheadRegExp: /\[search\[(.*?)(?:\|(.*?))?\]\]/mg,
prompt: "search for: '%0'",
handler: function(w)
{
this.lookaheadRegExp.lastIndex = w.matchStart;
var lookaheadMatch = this.lookaheadRegExp.exec(w.source);
if(lookaheadMatch && lookaheadMatch.index == w.matchStart) {
var label=lookaheadMatch[1];
var text=lookaheadMatch[2]||label;
var prompt=this.prompt.format([text]);
var btn=createTiddlyButton(w.output,label,prompt,
function(){story.search(this.getAttribute("searchText"))},"searchLink");
btn.setAttribute("searchText",text);
w.nextMatch = this.lookaheadRegExp.lastIndex;
}
}
});
//}}}
// // incremental search uses option settings instead of hard-coded delay and minimum input values
//{{{
var fn=config.macros.search.onKeyPress;
fn=fn.toString().replace(/500/g, "config.options.txtIncrementalSearchDelay||500");
fn=fn.toString().replace(/> 2/g, ">=(config.options.txtIncrementalSearchMin||3)");
eval("config.macros.search.onKeyPress="+fn);
//}}}
// // REPLACE story.search() for option to "show search results in a list"
//{{{
Story.prototype.search = function(text,useCaseSensitive,useRegExp)
{
var co=config.options; // abbrev
var re=new RegExp(useRegExp ? text : text.escapeRegExp(),useCaseSensitive ? "mg" : "img");
if (config.options.chkSearchHighlight) highlightHack=re;
var matches = store.search(re,co.chkSearchByDate?"modified":"title","");
if (co.chkSearchByDate) matches=matches.reverse(); // most recent first
var q = useRegExp ? "/" : "'";
clearMessage();
if (!matches.length) {
if (co.chkSearchListTiddler) discardSearchResults();
displayMessage(config.macros.search.failureMsg.format([q+text+q]));
} else {
if (co.chkSearchList||co.chkSearchListTiddler)
reportSearchResults(text,matches);
else {
var titles = []; for(var t=0; t<matches.length; t++) titles.push(matches[t].title);
this.closeAllTiddlers(); story.displayTiddlers(null,titles);
displayMessage(config.macros.search.successMsg.format([matches.length, q+text+q]));
}
}
highlightHack = null;
}
//}}}
// // REPLACE store.search() for enhanced searching/sorting options
//{{{
TiddlyWiki.prototype.search = function(searchRegExp,sortField,excludeTag,match)
{
var co=config.options; // abbrev
var tids = this.reverseLookup("tags",excludeTag,!!match,sortField);
var opened=[]; story.forEachTiddler(function(tid,elem){opened.push(tid);});
// eliminate tiddlers tagged with excluded tags
if (co.chkSearchExcludeTags&&co.txtSearchExcludeTags.length) {
var ex=co.txtSearchExcludeTags.readBracketedList();
var temp=[]; for(var t=tids.length-1; t>=0; t--)
if (!tids[t].tags.containsAny(ex)) temp.push(tids[t]);
tids=temp;
}
// scan for matching titles first...
var results = [];
if (co.chkSearchTitles) {
for(var t=0; t<tids.length; t++) {
if (co.chkSearchOpenTiddlers && !opened.contains(tids[t].title)) continue;
if(tids[t].title.search(searchRegExp)!=-1) results.push(tids[t]);
}
if (co.chkSearchShadows)
for (var t in config.shadowTiddlers) {
if (co.chkSearchOpenTiddlers && !opened.contains(t)) continue;
if ((t.search(searchRegExp)!=-1) && !store.tiddlerExists(t))
results.push((new Tiddler()).assign(t,config.shadowTiddlers[t]));
}
}
// then scan for matching text, tags, or field data
for(var t=0; t<tids.length; t++) {
if (co.chkSearchOpenTiddlers && !opened.contains(tids[t].title)) continue;
if (co.chkSearchText && tids[t].text.search(searchRegExp)!=-1)
results.pushUnique(tids[t]);
if (co.chkSearchTags && tids[t].tags.join(" ").search(searchRegExp)!=-1)
results.pushUnique(tids[t]);
if (co.chkSearchFields && store.forEachField!=undefined)
store.forEachField(tids[t],
function(tid,field,val) {
if (val.search(searchRegExp)!=-1) results.pushUnique(tids[t]);
},
true); // extended fields only
}
// then check for matching text in shadows
if (co.chkSearchShadows)
for (var t in config.shadowTiddlers) {
if (co.chkSearchOpenTiddlers && !opened.contains(t)) continue;
if ((config.shadowTiddlers[t].search(searchRegExp)!=-1) && !store.tiddlerExists(t))
results.pushUnique((new Tiddler()).assign(t,config.shadowTiddlers[t]));
}
// if not 'titles first', or sorting by modification date,
// re-sort results to so titles, text, tag and field matches are mixed together
if(!sortField) sortField = "title";
var bySortField=function(a,b){
if(a[sortField]==b[sortField])return(0);else return(a[sortField]<b[sortField])?-1:+1;
}
if (!co.chkSearchTitlesFirst || co.chkSearchByDate) results.sort(bySortField);
return results;
}
//}}}
// // HIJACK core {{{<<search>>}}} macro to add "report" and "simple inline" output
//{{{
config.macros.search.SOP_handler=config.macros.search.handler;
config.macros.search.handler = function(place,macroName,params)
{
// if "report", use SearchOptionsPlugin report generator for inline output
if (params[1]&¶ms[1].substr(0,6)=="report") {
var keyword=params[0];
var options=params[1].split("=")[1]; // split "report=option+option+..."
var heading=params[2]?params[2].unescapeLineBreaks():"";
var matches=store.search(new RegExp(keyword.escapeRegExp(),"img"),"title","excludeSearch");
if (matches.length) wikify(heading+window.formatSearchResults(keyword,matches,options),place);
} else if (params[1]) {
var keyword=params[0];
var heading=params[1]?params[1].unescapeLineBreaks():"";
var seperator=params[2]?params[2].unescapeLineBreaks():", ";
var matches=store.search(new RegExp(keyword.escapeRegExp(),"img"),"title","excludeSearch");
if (matches.length) {
var out=[];
for (var m=0; m<matches.length; m++) out.push("[["+matches[m].title+"]]");
wikify(heading+out.join(seperator),place);
}
} else
config.macros.search.SOP_handler.apply(this,arguments);
};
//}}}
// // SearchResults panel handling
//{{{
setStylesheet(".searchResults { padding:1em 1em 0 1em; }","searchResults"); // matches std tiddler padding
config.macros.search.createPanel=function(text,matches,body) {
function getByClass(e,c) { var d=e.getElementsByTagName("div");
for (var i=0;i<d.length;i++) if (hasClass(d[i],c)) return d[i]; }
var panel=createTiddlyElement(null,"div","searchPanel","searchPanel");
this.renderPanel(panel,text,matches,body);
var oldpanel=document.getElementById("searchPanel");
if (!oldpanel) { // insert new panel just above tiddlers
var da=document.getElementById("displayArea");
da.insertBefore(panel,da.firstChild);
} else { // if panel exists
var oldwrap=getByClass(oldpanel,"searchResults");
var newwrap=getByClass(panel,"searchResults");
// if no prior content, just insert new content
if (!oldwrap) oldpanel.insertBefore(newwrap,null);
else { // swap search results content but leave containing panel intact
oldwrap.style.display='block'; // unfold wrapper if needed
var i=oldwrap.getElementsByTagName("input")[0]; // get input field
if (i) { var pos=this.getCursorPos(i); i.onblur=null; } // get cursor pos, ignore blur
oldpanel.replaceChild(newwrap,oldwrap);
panel=oldpanel; // use existing panel
}
}
this.showPanel(true,pos);
return panel;
}
config.macros.search.renderPanel=function(panel,text,matches,body) {
var wrap=createTiddlyElement(panel,"div",null,"searchResults");
wrap.onmouseover = function(e){ addClass(this,"selected"); }
wrap.onmouseout = function(e){ removeClass(this,"selected"); }
// create toolbar: "open all", "fold/unfold", "close"
var tb=createTiddlyElement(wrap,"div",null,"toolbar");
var b=createTiddlyButton(tb, "open all", "open all matching tiddlers", function() {
story.displayTiddlers(null,this.getAttribute("list").readBracketedList()); return false; },"button");
var list=""; for(var t=0;t<matches.length;t++) list+='[['+matches[t].title+']] ';
b.setAttribute("list",list);
var b=createTiddlyButton(tb, "fold", "toggle display of search results", function() {
config.macros.search.foldPanel(this); return false; },"button");
var b=createTiddlyButton(tb, "close", "dismiss search results", function() {
config.macros.search.showPanel(false); return false; },"button");
createTiddlyText(createTiddlyElement(wrap,"div",null,"title"),"Search for: "+text); // title
wikify(body,createTiddlyElement(wrap,"div",null,"viewer")); // report
return panel;
}
config.macros.search.showPanel=function(show,pos) {
var panel=document.getElementById("searchPanel");
var i=panel.getElementsByTagName("input")[0];
i.onfocus=show?function(){config.macros.search.stayFocused(true);}:null;
i.onblur=show?function(){config.macros.search.stayFocused(false);}:null;
if (show && panel.style.display=="block") { // if shown, grab focus, restore cursor
if (i&&this.stayFocused()) { i.focus(); this.setCursorPos(i,pos); }
return;
}
if(!config.options.chkAnimate) {
panel.style.display=show?"block":"none";
if (!show) { removeChildren(panel); config.macros.search.stayFocused(false); }
} else {
var s=new Slider(panel,show,false,show?"none":"children");
s.callback=function(e,p){e.style.overflow="visible";}
anim.startAnimating(s);
}
return panel;
}
config.macros.search.foldPanel=function(button) {
var d=document.getElementById("searchPanel").getElementsByTagName("div");
for (var i=0;i<d.length;i++) if (hasClass(d[i],"viewer")) var v=d[i]; if (!v) return;
var show=v.style.display=="none";
if(!config.options.chkAnimate)
v.style.display=show?"block":"none";
else {
var s=new Slider(v,show,false,"none");
s.callback=function(e,p){e.style.overflow="visible";}
anim.startAnimating(s);
}
button.innerHTML=show?"fold":"unfold";
return false;
}
config.macros.search.stayFocused=function(keep) { // TRUE/FALSE=set value, no args=get value
if (keep===undefined) return this.keepReportInFocus;
this.keepReportInFocus=keep;
return keep
}
config.macros.search.getCursorPos=function(i) {
var s=0; var e=0; if (!i) return { start:s, end:e };
try {
if (i.setSelectionRange) // FF
{ s=i.selectionStart; e=i.selectionEnd; }
if (document.selection && document.selection.createRange) { // IE
var r=document.selection.createRange().duplicate();
var len=r.text.length; s=0-r.moveStart('character',-100000); e=s+len;
}
}catch(e){};
return { start:s, end:e };
}
config.macros.search.setCursorPos=function(i,pos) {
if (!i||!pos) return; var s=pos.start; var e=pos.end;
if (i.setSelectionRange) //FF
i.setSelectionRange(s,e);
if (i.createTextRange) // IE
{ var r=i.createTextRange(); r.collapse(true); r.moveStart("character",s); r.select(); }
}
//}}}
// // SearchResults report generation
// note: these functions are defined globally, so they can be more easily redefined to customize report formats//
//{{{
if (!window.reportSearchResults) window.reportSearchResults=function(text,matches)
{
var cms=config.macros.search; // abbrev
var body=window.formatSearchResults(text,matches);
if (!config.options.chkSearchListTiddler) // show #searchResults panel
window.scrollTo(0,ensureVisible(cms.createPanel(text,matches,body)));
else { // write [[SearchResults]] tiddler
var title=cms.reportTitle;
var who=config.options.txtUserName;
var when=new Date();
var tags="excludeLists excludeSearch temporary";
var tid=store.getTiddler(title); if (!tid) tid=new Tiddler();
tid.set(title,body,who,when,tags);
store.addTiddler(tid);
story.closeTiddler(title);
story.displayTiddler(null,title);
}
}
if (!window.formatSearchResults) window.formatSearchResults=function(text,matches,opt)
{
var body='';
var title=config.macros.search.reportTitle
var q = config.options.chkRegExpSearch ? "/" : "'";
if (!opt) var opt="all";
var parts=opt.split("+");
for (var i=0; i<parts.length; i++) { var p=parts[i].toLowerCase();
if (p=="again"||p=="all") body+=window.formatSearchResults_again(text,matches);
if (p=="summary"||p=="all") body+=window.formatSearchResults_summary(text,matches);
if (p=="list"||p=="all") body+=window.formatSearchResults_list(text,matches);
if (p=="buttons"||p=="all") body+=window.formatSearchResults_buttons(text,matches);
}
return body;
}
if (!window.formatSearchResults_again) window.formatSearchResults_again=function(text,matches)
{
var title=config.macros.search.reportTitle
var body='';
// search again
body+='{{span{<<search "'+text.replace(/"/g,'"')+'">> /%\n';
body+='%/<html><input type="button" value="search again"';
body+=' onclick="var t=this.parentNode.parentNode.getElementsByTagName(\'input\')[0];';
body+=' config.macros.search.doSearch(t); return false;">';
if (!config.options.chkSearchResultsOptions) { // omit "options..."
body+='</html>}}}\n\n';
return body;
}
body+=' <a href="javascript:;" onclick="';
body+=' var e=this.parentNode.nextSibling;';
body+=' var show=e.style.display!=\'block\';';
body+=' if(!config.options.chkAnimate) e.style.display=show?\'block\':\'none\';';
body+=' else anim.startAnimating(new Slider(e,show,false,\'none\'));';
body+=' return false;">options...</a>';
body+='</html>@@display:none;border-left:1px dotted;margin-left:1em;padding:0;padding-left:.5em;font-size:90%;/%\n';
body+=' %/<<option chkSearchTitles>>titles /%\n';
body+=' %/<<option chkSearchText>>text /%\n';
body+=' %/<<option chkSearchTags>>tags /%\n';
body+=' %/<<option chkSearchFields>>fields /%\n';
body+=' %/<<option chkSearchShadows>>shadows\n';
body+=' <<option chkCaseSensitiveSearch>>case-sensitive /%\n';
body+=' %/<<option chkRegExpSearch>>text patterns /%\n';
body+=' %/<<option chkSearchByDate>>sorted by date\n';
body+=' <<option chkSearchHighlight>> highlight matching text in displayed tiddlers\n';
body+=' <<option chkIncrementalSearch>>incremental key-by-key search: /%\n';
body+=' %/{{twochar{<<option txtIncrementalSearchMin>>}}} or more characters, /%\n';
body+=' %/{{threechar{<<option txtIncrementalSearchDelay>>}}} msec delay\n';
body+=' <<option chkSearchOpenTiddlers>> search only in tiddlers that are currently displayed\n';
body+=' <<option chkSearchExcludeTags>>exclude tiddlers tagged with:\n';
body+=' {{editor{<<option txtSearchExcludeTags>>}}}/%\n';
body+='%/@@}}}\n\n';
return body;
}
if (!window.formatSearchResults_summary) window.formatSearchResults_summary=function(text,matches)
{
// summary: nn tiddlers found matching '...', options used
var body='';
var co=config.options; // abbrev
var title=config.macros.search.reportTitle
var q = co.chkRegExpSearch ? "/" : "'";
body+="''"+config.macros.search.successMsg.format([matches.length,q+"{{{"+text+"}}}"+q])+"''\n";
var opts=[];
if (co.chkSearchTitles) opts.push("titles");
if (co.chkSearchText) opts.push("text");
if (co.chkSearchTags) opts.push("tags");
if (co.chkSearchFields) opts.push("fields");
if (co.chkSearchShadows) opts.push("shadows");
if (co.chkSearchOpenTiddlers) body+="^^//search limited to displayed tiddlers only//^^\n";
body+="~~ searched in "+opts.join(" + ")+"~~\n";
body+=(co.chkCaseSensitiveSearch||co.chkRegExpSearch?"^^ using ":"")
+(co.chkCaseSensitiveSearch?"case-sensitive ":"")
+(co.chkRegExpSearch?"pattern ":"")
+(co.chkCaseSensitiveSearch||co.chkRegExpSearch?"matching^^\n":"");
return body;
}
if (!window.formatSearchResults_list) window.formatSearchResults_list=function(text,matches)
{
// bullet list of links to matching tiddlers
var body='';
var co=config.options; // abbrev
var pattern=co.chkRegExpSearch?text:text.escapeRegExp();
var sensitive=co.chkCaseSensitiveSearch?"mg":"img";
var link='{{tiddlyLinkExisting{<html><nowiki><a href="javascript:;" onclick="'
+'if(config.options.chkSearchHighlight)'
+' highlightHack=new RegExp(\x27'+pattern+'\x27.escapeRegExp(),\x27'+sensitive+'\x27);'
+'story.displayTiddler(null,\x27%0\x27);'
+'highlightHack = null; return false;'
+'" title="%2">%1</a></html>}}}';
for(var t=0;t<matches.length;t++) {
body+="* ";
if (co.chkSearchByDate)
body+=matches[t].modified.formatString('YYYY.0MM.0DD 0hh:0mm')+" ";
var title=matches[t].title;
var fixup=title.replace(/'/g,"\\x27").replace(/"/g,"\\x22");
var tid=store.getTiddler(title);
var tip=tid?tid.getSubtitle():''; tip=tip.replace(/"/g,""");
body+=link.format([fixup,title,tip])+'\n';
}
return body;
}
if (!window.formatSearchResults_buttons) window.formatSearchResults_buttons=function(text,matches)
{
// embed buttons only if writing SearchResults to tiddler
if (!config.options.chkSearchListTiddler) return "";
// "open all" button
var title=config.macros.search.reportTitle;
var body="";
body+="@@diplay:block;<html><input type=\"button\" href=\"javascript:;\" "
+"onclick=\"story.displayTiddlers(null,[";
for(var t=0;t<matches.length;t++)
body+="'"+matches[t].title.replace(/\'/mg,"\\'")+"'"+((t<matches.length-1)?", ":"");
body+="],1);\" accesskey=\"O\" value=\"open all matching tiddlers\"></html> ";
// "discard SearchResults" button
body+="<html><input type=\"button\" href=\"javascript:;\" "
+"onclick=\"discardSearchResults()\" value=\"discard "+title+"\"></html>";
body+="@@\n";
return body;
}
if (!window.discardSearchResults) window.discardSearchResults=function()
{
// remove the tiddler
story.closeTiddler(config.macros.search.reportTitle);
store.deleteTiddler(config.macros.search.reportTitle);
store.notify(config.macros.search.reportTitle,true);
}
//}}}
<<search>><<closeAll>><<permaview>><<newTiddler>><<newJournal "DD MMM YYYY" "journal">><<saveChanges>><<slider chkSliderOptionsPanel OptionsPanel "options »" "Change TiddlyWiki advanced options">>
<<tabs txtMainTab "Timeline" "Timeline" TabTimeline "All" "All tiddlers" TabAll "Tags" "All tags" TabTags "More" "More lists" TabMore>>
/***
|Name|SinglePageModePlugin|
|Source|http://www.TiddlyTools.com/#SinglePageModePlugin|
|Documentation|http://www.TiddlyTools.com/#SinglePageModePluginInfo|
|Version|2.9.6|
|Author|Eric Shulman|
|License|http://www.TiddlyTools.com/#LegalStatements|
|~CoreVersion|2.1|
|Type|plugin|
|Description|Show tiddlers one at a time with automatic permalink, or always open tiddlers at top/bottom of page.|
This plugin allows you to configure TiddlyWiki to navigate more like a traditional multipage web site with only one tiddler displayed at a time.
!!!!!Documentation
>see [[SinglePageModePluginInfo]]
!!!!!Configuration
<<<
<<option chkSinglePageMode>> Display one tiddler at a time
><<option chkSinglePagePermalink>> Automatically permalink current tiddler
><<option chkSinglePageKeepFoldedTiddlers>> Don't close tiddlers that are folded
><<option chkSinglePageKeepEditedTiddlers>> Don't close tiddlers that are being edited
<<option chkTopOfPageMode>> Open tiddlers at the top of the page
<<option chkBottomOfPageMode>> Open tiddlers at the bottom of the page
<<option chkSinglePageAutoScroll>> Automatically scroll tiddler into view (if needed)
Notes:
* The "display one tiddler at a time" option can also be //temporarily// set/reset by including a 'paramifier' in the document URL: {{{#SPM:true}}} or {{{#SPM:false}}}.
* If more than one display mode is selected, 'one at a time' display takes precedence over both 'top' and 'bottom' settings, and if 'one at a time' setting is not used, 'top of page' takes precedence over 'bottom of page'.
* When using Apple's Safari browser, automatically setting the permalink causes an error and is disabled.
<<<
!!!!!Revisions
<<<
2008.10.17 [2.9.6] changed chkSinglePageAutoScroll default to false
| Please see [[SinglePageModePluginInfo]] for previous revision details |
2005.08.15 [1.0.0] Initial Release. Support for BACK/FORWARD buttons adapted from code developed by Clint Checketts.
<<<
!!!!!Code
***/
//{{{
version.extensions.SinglePageModePlugin= {major: 2, minor: 9, revision: 6, date: new Date(2008,10,17)};
//}}}
//{{{
config.paramifiers.SPM = { onstart: function(v) {
config.options.chkSinglePageMode=eval(v);
if (config.options.chkSinglePageMode && config.options.chkSinglePagePermalink && !config.browser.isSafari) {
config.lastURL = window.location.hash;
if (!config.SPMTimer) config.SPMTimer=window.setInterval(function() {checkLastURL();},1000);
}
} };
//}}}
//{{{
if (config.options.chkSinglePageMode==undefined)
config.options.chkSinglePageMode=false;
if (config.options.chkSinglePagePermalink==undefined)
config.options.chkSinglePagePermalink=true;
if (config.options.chkSinglePageKeepFoldedTiddlers==undefined)
config.options.chkSinglePageKeepFoldedTiddlers=false;
if (config.options.chkSinglePageKeepEditedTiddlers==undefined)
config.options.chkSinglePageKeepEditedTiddlers=false;
if (config.options.chkTopOfPageMode==undefined)
config.options.chkTopOfPageMode=false;
if (config.options.chkBottomOfPageMode==undefined)
config.options.chkBottomOfPageMode=false;
if (config.options.chkSinglePageAutoScroll==undefined)
config.options.chkSinglePageAutoScroll=false;
//}}}
//{{{
config.SPMTimer = 0;
config.lastURL = window.location.hash;
function checkLastURL()
{
if (!config.options.chkSinglePageMode)
{ window.clearInterval(config.SPMTimer); config.SPMTimer=0; return; }
if (config.lastURL == window.location.hash) return; // no change in hash
var tids=decodeURIComponent(window.location.hash.substr(1)).readBracketedList();
if (tids.length==1) // permalink (single tiddler in URL)
story.displayTiddler(null,tids[0]);
else { // restore permaview or default view
config.lastURL = window.location.hash;
if (!tids.length) tids=store.getTiddlerText("DefaultTiddlers").readBracketedList();
story.closeAllTiddlers();
story.displayTiddlers(null,tids);
}
}
if (Story.prototype.SPM_coreDisplayTiddler==undefined)
Story.prototype.SPM_coreDisplayTiddler=Story.prototype.displayTiddler;
Story.prototype.displayTiddler = function(srcElement,tiddler,template,animate,slowly)
{
var title=(tiddler instanceof Tiddler)?tiddler.title:tiddler;
var tiddlerElem=document.getElementById(story.idPrefix+title); // ==null unless tiddler is already displayed
var opt=config.options;
var single=opt.chkSinglePageMode && !startingUp;
var top=opt.chkTopOfPageMode && !startingUp;
var bottom=opt.chkBottomOfPageMode && !startingUp;
if (single) {
story.forEachTiddler(function(tid,elem) {
// skip current tiddler and, optionally, tiddlers that are folded.
if ( tid==title
|| (opt.chkSinglePageKeepFoldedTiddlers && elem.getAttribute("folded")=="true"))
return;
// if a tiddler is being edited, ask before closing
if (elem.getAttribute("dirty")=="true") {
if (opt.chkSinglePageKeepEditedTiddlers) return;
// if tiddler to be displayed is already shown, then leave active tiddler editor as is
// (occurs when switching between view and edit modes)
if (tiddlerElem) return;
// otherwise, ask for permission
var msg="'"+tid+"' is currently being edited.\n\n";
msg+="Press OK to save and close this tiddler\nor press Cancel to leave it opened";
if (!confirm(msg)) return; else story.saveTiddler(tid);
}
story.closeTiddler(tid);
});
}
else if (top)
arguments[0]=null;
else if (bottom)
arguments[0]="bottom";
if (single && opt.chkSinglePagePermalink && !config.browser.isSafari) {
window.location.hash = encodeURIComponent(String.encodeTiddlyLink(title));
config.lastURL = window.location.hash;
document.title = wikifyPlain("SiteTitle") + " - " + title;
if (!config.SPMTimer) config.SPMTimer=window.setInterval(function() {checkLastURL();},1000);
}
if (tiddlerElem && tiddlerElem.getAttribute("dirty")=="true") { // editing... move tiddler without re-rendering
var isTopTiddler=(tiddlerElem.previousSibling==null);
if (!isTopTiddler && (single || top))
tiddlerElem.parentNode.insertBefore(tiddlerElem,tiddlerElem.parentNode.firstChild);
else if (bottom)
tiddlerElem.parentNode.insertBefore(tiddlerElem,null);
else this.SPM_coreDisplayTiddler.apply(this,arguments); // let CORE render tiddler
} else
this.SPM_coreDisplayTiddler.apply(this,arguments); // let CORE render tiddler
var tiddlerElem=document.getElementById(story.idPrefix+title);
if (tiddlerElem&&opt.chkSinglePageAutoScroll) {
// scroll to top of page or top of tiddler
var isTopTiddler=(tiddlerElem.previousSibling==null);
var yPos=isTopTiddler?0:ensureVisible(tiddlerElem);
// if animating, defer scroll until after animation completes
var delay=opt.chkAnimate?config.animDuration+10:0;
setTimeout("window.scrollTo(0,"+yPos+")",delay);
}
}
if (Story.prototype.SPM_coreDisplayTiddlers==undefined)
Story.prototype.SPM_coreDisplayTiddlers=Story.prototype.displayTiddlers;
Story.prototype.displayTiddlers = function() {
// suspend single/top/bottom modes when showing multiple tiddlers
var opt=config.options;
var saveSPM=opt.chkSinglePageMode; opt.chkSinglePageMode=false;
var saveTPM=opt.chkTopOfPageMode; opt.chkTopOfPageMode=false;
var saveBPM=opt.chkBottomOfPageMode; opt.chkBottomOfPageMode=false;
this.SPM_coreDisplayTiddlers.apply(this,arguments);
opt.chkBottomOfPageMode=saveBPM;
opt.chkTopOfPageMode=saveTPM;
opt.chkSinglePageMode=saveSPM;
}
//}}}
[[Aquatic Ecology, Aquaculture & Environmental Impact Assessment|http://www.gusmao.info]]<<tiddler ToggleRightSidebar with: ".">>
@@display:none;@@[[FelipeGusmão|http://www.gusmao.info]]
/***
!My hacks /% ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~%/
***/
/*{{{*/
body {padding-bottom:10em;}
.header {background:transparent;}
.headerShadow {background:transparent; text-decoration:none;}
.headerShadow a {background:transparent; text-decoration:none;}
.headerForeground {display:none; color:transparent;}
.headerForeground a {font-weight:normal; background:transparent; text-decoration:none;}
.siteTitle {margin-left:150px; font-size:4.5em; font-family: Georgia, Palatino, Palatino Linotype, Times, Times New Roman, serif;font-weight:normal;}
.siteSubtitle {padding-left:150px; font-size:1em;}
.header a:hover {background:transparent; text-decoration:none;}
.headerForeground {display:none;}
#mainMenu {padding-top:3em;}
a:hover {background-color:[[ColorPalette::Background]]; color:[[ColorPalette::PrimaryMid]]; text-decoration:underline;}
#sidebarOptions .sliderPanel a:hover {color:[[ColorPalette::PrimaryMid]]; background:[[ColorPalette::Background]]; text-decoration:underline;}}
.selected .toolbar a {border:1px solid [[ColorPalette::Foreground]]; background-color:[[ColorPalette::Foreground]];}
.selected .toolbar a:hover {border:1px solid [[ColorPalette::Foreground]]; background-color:[[ColorPalette::TertiaryPale]];text-decoration:none;}
#messageArea {border:1px solid [[ColorPalette::PrimaryMid]]; background: transparent; color:[[ColorPalette::Foreground]];}
#messageArea .button {border:1px solid [[ColorPalette::Foreground]]; background-color:[[ColorPalette::Foreground]]; text-decoration:none;}
#sidebarOptions .button:hover {text-decoration:none; background:none; background-color:none; border:1px solid [[ColorPalette::Foreground]];}
.annotation {background:none;}
.toggle a {display:block; position:absolute; bottom: 0; background:none; background-colour:none; color: transparent; text-decoration:none;}
.statcounter {display:none;}
#contentWrapper
{
margin: 0 auto;
width: 760px;
position: relative;
}
/*}}}*/
/***
!Table hacks /% ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~%/
***/
/*{{{*/
.viewer .tableRWrapper {
float: right;
}
.viewer .tableLWrapper {
float: left;
}
.viewer div.centeredTable {
text-align: center;
}
.viewer div.centeredTable table {
margin: 0 auto;
text-align: left;
}
.viewer table.borderless,
.viewer table.borderless * {
border: 0;
vertical-align: top;
}
/*}}}*/
/***
!IE Display hacks /% ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~%/
***/
/*{{{*/
body{
_text-align: center;
}
#contentWrapper
{
/* _width: 760px; CSS UNDERSCORE HACK FOR PROPER WIN/IE DISPLAY */
_text-align: left; /* CSS UNDERSCORE HACK FOR PROPER WIN/IE DISPLAY */
}
#messageArea{
_position: absolute;
}
/*}}}*/
/*{{{*/
body {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];}
a {color:[[ColorPalette::PrimaryMid]];}
a:hover {background-color:[[ColorPalette::PrimaryMid]]; color:[[ColorPalette::Background]];}
a img {border:0;}
h1,h2,h3,h4,h5,h6 {color:[[ColorPalette::SecondaryDark]]; background:transparent;}
h1 {border-bottom:2px solid [[ColorPalette::TertiaryLight]];}
h2,h3 {border-bottom:1px solid [[ColorPalette::TertiaryLight]];}
.button {color:[[ColorPalette::PrimaryDark]]; border:1px solid [[ColorPalette::Background]];}
.button:hover {color:[[ColorPalette::PrimaryDark]]; background:[[ColorPalette::SecondaryLight]]; border-color:[[ColorPalette::SecondaryMid]];}
.button:active {color:[[ColorPalette::Background]]; background:[[ColorPalette::SecondaryMid]]; border:1px solid [[ColorPalette::SecondaryDark]];}
.header {background:[[ColorPalette::PrimaryMid]];}
.headerShadow {color:[[ColorPalette::Foreground]];}
.headerShadow a {font-weight:normal; color:[[ColorPalette::Foreground]];}
.headerForeground {color:[[ColorPalette::Background]];}
.headerForeground a {font-weight:normal; color:[[ColorPalette::PrimaryPale]];}
.tabSelected{color:[[ColorPalette::PrimaryDark]];
background:[[ColorPalette::TertiaryPale]];
border-left:1px solid [[ColorPalette::TertiaryLight]];
border-top:1px solid [[ColorPalette::TertiaryLight]];
border-right:1px solid [[ColorPalette::TertiaryLight]];
}
.tabUnselected {color:[[ColorPalette::Background]]; background:[[ColorPalette::TertiaryMid]];}
.tabContents {color:[[ColorPalette::PrimaryDark]]; background:[[ColorPalette::TertiaryPale]]; border:1px solid [[ColorPalette::TertiaryLight]];}
.tabContents .button {border:0;}
#sidebar {}
#sidebarOptions input {border:1px solid [[ColorPalette::PrimaryMid]];}
#sidebarOptions .sliderPanel {background:[[ColorPalette::PrimaryPale]];}
#sidebarOptions .sliderPanel a {border:none;color:[[ColorPalette::PrimaryMid]];}
#sidebarOptions .sliderPanel a:hover {color:[[ColorPalette::Background]]; background:[[ColorPalette::PrimaryMid]];}
#sidebarOptions .sliderPanel a:active {color:[[ColorPalette::PrimaryMid]]; background:[[ColorPalette::Background]];}
.wizard {background:[[ColorPalette::PrimaryPale]]; border:1px solid [[ColorPalette::PrimaryMid]];}
.wizard h1 {color:[[ColorPalette::PrimaryDark]]; border:none;}
.wizard h2 {color:[[ColorPalette::Foreground]]; border:none;}
.wizardStep {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];
border:1px solid [[ColorPalette::PrimaryMid]];}
.wizardStep.wizardStepDone {background:[[ColorPalette::TertiaryLight]];}
.wizardFooter {background:[[ColorPalette::PrimaryPale]];}
.wizardFooter .status {background:[[ColorPalette::PrimaryDark]]; color:[[ColorPalette::Background]];}
.wizard .button {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::SecondaryLight]]; border: 1px solid;
border-color:[[ColorPalette::SecondaryPale]] [[ColorPalette::SecondaryDark]] [[ColorPalette::SecondaryDark]] [[ColorPalette::SecondaryPale]];}
.wizard .button:hover {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::Background]];}
.wizard .button:active {color:[[ColorPalette::Background]]; background:[[ColorPalette::Foreground]]; border: 1px solid;
border-color:[[ColorPalette::PrimaryDark]] [[ColorPalette::PrimaryPale]] [[ColorPalette::PrimaryPale]] [[ColorPalette::PrimaryDark]];}
.wizard .notChanged {background:transparent;}
.wizard .changedLocally {background:#80ff80;}
.wizard .changedServer {background:#8080ff;}
.wizard .changedBoth {background:#ff8080;}
.wizard .notFound {background:#ffff80;}
.wizard .putToServer {background:#ff80ff;}
.wizard .gotFromServer {background:#80ffff;}
#messageArea {border:1px solid [[ColorPalette::SecondaryMid]]; background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]];}
#messageArea .button {color:[[ColorPalette::PrimaryMid]]; background:[[ColorPalette::SecondaryPale]]; border:none;}
.popupTiddler {background:[[ColorPalette::TertiaryPale]]; border:2px solid [[ColorPalette::TertiaryMid]];}
.popup {background:[[ColorPalette::TertiaryPale]]; color:[[ColorPalette::TertiaryDark]]; border-left:1px solid [[ColorPalette::TertiaryMid]]; border-top:1px solid [[ColorPalette::TertiaryMid]]; border-right:2px solid [[ColorPalette::TertiaryDark]]; border-bottom:2px solid [[ColorPalette::TertiaryDark]];}
.popup hr {color:[[ColorPalette::PrimaryDark]]; background:[[ColorPalette::PrimaryDark]]; border-bottom:1px;}
.popup li.disabled {color:[[ColorPalette::TertiaryMid]];}
.popup li a, .popup li a:visited {color:[[ColorPalette::Foreground]]; border: none;}
.popup li a:hover {background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]]; border: none;}
.popup li a:active {background:[[ColorPalette::SecondaryPale]]; color:[[ColorPalette::Foreground]]; border: none;}
.popupHighlight {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];}
.listBreak div {border-bottom:1px solid [[ColorPalette::TertiaryDark]];}
.tiddler .defaultCommand {font-weight:bold;}
.shadow .title {color:[[ColorPalette::TertiaryDark]];}
.title {color:[[ColorPalette::SecondaryDark]];}
.subtitle {color:[[ColorPalette::TertiaryDark]];}
.toolbar {color:[[ColorPalette::PrimaryMid]];}
.toolbar a {color:[[ColorPalette::TertiaryLight]];}
.selected .toolbar a {color:[[ColorPalette::TertiaryMid]];}
.selected .toolbar a:hover {color:[[ColorPalette::Foreground]];}
.tagging, .tagged {border:1px solid [[ColorPalette::TertiaryPale]]; background-color:[[ColorPalette::TertiaryPale]];}
.selected .tagging, .selected .tagged {background-color:[[ColorPalette::TertiaryLight]]; border:1px solid [[ColorPalette::TertiaryMid]];}
.tagging .listTitle, .tagged .listTitle {color:[[ColorPalette::PrimaryDark]];}
.tagging .button, .tagged .button {border:none;}
.footer {color:[[ColorPalette::TertiaryLight]];}
.selected .footer {color:[[ColorPalette::TertiaryMid]];}
.sparkline {background:[[ColorPalette::PrimaryPale]]; border:0;}
.sparktick {background:[[ColorPalette::PrimaryDark]];}
.error, .errorButton {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::Error]];}
.warning {color:[[ColorPalette::Foreground]]; background:[[ColorPalette::SecondaryPale]];}
.lowlight {background:[[ColorPalette::TertiaryLight]];}
.zoomer {background:none; color:[[ColorPalette::TertiaryMid]]; border:3px solid [[ColorPalette::TertiaryMid]];}
.imageLink, #displayArea .imageLink {background:transparent;}
.annotation {background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]]; border:2px solid [[ColorPalette::SecondaryMid]];}
.viewer .listTitle {list-style-type:none; margin-left:-2em;}
.viewer .button {border:1px solid [[ColorPalette::SecondaryMid]];}
.viewer blockquote {border-left:3px solid [[ColorPalette::TertiaryDark]];}
.viewer table, table.twtable {border:2px solid [[ColorPalette::TertiaryDark]];}
.viewer th, .viewer thead td, .twtable th, .twtable thead td {background:[[ColorPalette::SecondaryMid]]; border:1px solid [[ColorPalette::TertiaryDark]]; color:[[ColorPalette::Background]];}
.viewer td, .viewer tr, .twtable td, .twtable tr {border:1px solid [[ColorPalette::TertiaryDark]];}
.viewer pre {border:1px solid [[ColorPalette::SecondaryLight]]; background:[[ColorPalette::SecondaryPale]];}
.viewer code {color:[[ColorPalette::SecondaryDark]];}
.viewer hr {border:0; border-top:dashed 1px [[ColorPalette::TertiaryDark]]; color:[[ColorPalette::TertiaryDark]];}
.highlight, .marked {background:[[ColorPalette::SecondaryLight]];}
.editor input {border:1px solid [[ColorPalette::PrimaryMid]];}
.editor textarea {border:1px solid [[ColorPalette::PrimaryMid]]; width:100%;}
.editorFooter {color:[[ColorPalette::TertiaryMid]];}
.readOnly {background:[[ColorPalette::TertiaryPale]];}
#backstageArea {background:[[ColorPalette::Foreground]]; color:[[ColorPalette::TertiaryMid]];}
#backstageArea a {background:[[ColorPalette::Foreground]]; color:[[ColorPalette::Background]]; border:none;}
#backstageArea a:hover {background:[[ColorPalette::SecondaryLight]]; color:[[ColorPalette::Foreground]]; }
#backstageArea a.backstageSelTab {background:[[ColorPalette::Background]]; color:[[ColorPalette::Foreground]];}
#backstageButton a {background:none; color:[[ColorPalette::Background]]; border:none;}
#backstageButton a:hover {background:[[ColorPalette::Foreground]]; color:[[ColorPalette::Background]]; border:none;}
#backstagePanel {background:[[ColorPalette::Background]]; border-color: [[ColorPalette::Background]] [[ColorPalette::TertiaryDark]] [[ColorPalette::TertiaryDark]] [[ColorPalette::TertiaryDark]];}
.backstagePanelFooter .button {border:none; color:[[ColorPalette::Background]];}
.backstagePanelFooter .button:hover {color:[[ColorPalette::Foreground]];}
#backstageCloak {background:[[ColorPalette::Foreground]]; opacity:0.6; filter:'alpha(opacity=60)';}
/*}}}*/
/*{{{*/
* html .tiddler {height:1%;}
body {font-size:.75em; font-family:arial,helvetica; margin:0; padding:0;}
h1,h2,h3,h4,h5,h6 {font-weight:bold; text-decoration:none;}
h1,h2,h3 {padding-bottom:1px; margin-top:1.2em;margin-bottom:0.3em;}
h4,h5,h6 {margin-top:1em;}
h1 {font-size:1.35em;}
h2 {font-size:1.25em;}
h3 {font-size:1.1em;}
h4 {font-size:1em;}
h5 {font-size:.9em;}
hr {height:1px;}
a {text-decoration:none;}
dt {font-weight:bold;}
ol {list-style-type:decimal;}
ol ol {list-style-type:lower-alpha;}
ol ol ol {list-style-type:lower-roman;}
ol ol ol ol {list-style-type:decimal;}
ol ol ol ol ol {list-style-type:lower-alpha;}
ol ol ol ol ol ol {list-style-type:lower-roman;}
ol ol ol ol ol ol ol {list-style-type:decimal;}
.txtOptionInput {width:11em;}
#contentWrapper .chkOptionInput {border:0;}
.externalLink {text-decoration:underline;}
.indent {margin-left:3em;}
.outdent {margin-left:3em; text-indent:-3em;}
code.escaped {white-space:nowrap;}
.tiddlyLinkExisting {font-weight:bold;}
.tiddlyLinkNonExisting {font-style:italic;}
/* the 'a' is required for IE, otherwise it renders the whole tiddler in bold */
a.tiddlyLinkNonExisting.shadow {font-weight:bold;}
#mainMenu .tiddlyLinkExisting,
#mainMenu .tiddlyLinkNonExisting,
#sidebarTabs .tiddlyLinkNonExisting {font-weight:normal; font-style:normal;}
#sidebarTabs .tiddlyLinkExisting {font-weight:bold; font-style:normal;}
.header {position:relative;}
.header a:hover {background:transparent;}
.headerShadow {position:relative; padding:4.5em 0 1em 1em; left:-1px; top:-1px;}
.headerForeground {position:absolute; padding:4.5em 0 1em 1em; left:0px; top:0px;}
.siteTitle {font-size:3em;}
.siteSubtitle {font-size:1.2em;}
#mainMenu {position:absolute; left:0; width:10em; text-align:right; line-height:1.6em; padding:1.5em 0.5em 0.5em 0.5em; font-size:1.1em;}
#sidebar {position:absolute; right:3px; width:16em; font-size:.9em;}
#sidebarOptions {padding-top:0.3em;}
#sidebarOptions a {margin:0 0.2em; padding:0.2em 0.3em; display:block;}
#sidebarOptions input {margin:0.4em 0.5em;}
#sidebarOptions .sliderPanel {margin-left:1em; padding:0.5em; font-size:.85em;}
#sidebarOptions .sliderPanel a {font-weight:bold; display:inline; padding:0;}
#sidebarOptions .sliderPanel input {margin:0 0 0.3em 0;}
#sidebarTabs .tabContents {width:15em; overflow:hidden;}
.wizard {padding:0.1em 1em 0 2em;}
.wizard h1 {font-size:2em; font-weight:bold; background:none; padding:0; margin:0.4em 0 0.2em;}
.wizard h2 {font-size:1.2em; font-weight:bold; background:none; padding:0; margin:0.4em 0 0.2em;}
.wizardStep {padding:1em 1em 1em 1em;}
.wizard .button {margin:0.5em 0 0; font-size:1.2em;}
.wizardFooter {padding:0.8em 0.4em 0.8em 0;}
.wizardFooter .status {padding:0 0.4em; margin-left:1em;}
.wizard .button {padding:0.1em 0.2em;}
#messageArea {position:fixed; top:2em; right:0; margin:0.5em; padding:0.5em; z-index:2000; _position:absolute;}
.messageToolbar {display:block; text-align:right; padding:0.2em;}
#messageArea a {text-decoration:underline;}
.tiddlerPopupButton {padding:0.2em;}
.popupTiddler {position: absolute; z-index:300; padding:1em; margin:0;}
.popup {position:absolute; z-index:300; font-size:.9em; padding:0; list-style:none; margin:0;}
.popup .popupMessage {padding:0.4em;}
.popup hr {display:block; height:1px; width:auto; padding:0; margin:0.2em 0;}
.popup li.disabled {padding:0.4em;}
.popup li a {display:block; padding:0.4em; font-weight:normal; cursor:pointer;}
.listBreak {font-size:1px; line-height:1px;}
.listBreak div {margin:2px 0;}
.tabset {padding:1em 0 0 0.5em;}
.tab {margin:0 0 0 0.25em; padding:2px;}
.tabContents {padding:0.5em;}
.tabContents ul, .tabContents ol {margin:0; padding:0;}
.txtMainTab .tabContents li {list-style:none;}
.tabContents li.listLink { margin-left:.75em;}
#contentWrapper {display:block;}
#splashScreen {display:none;}
#displayArea {margin:1em 17em 0 14em;}
.toolbar {text-align:right; font-size:.9em;}
.tiddler {padding:1em 1em 0;}
.missing .viewer,.missing .title {font-style:italic;}
.title {font-size:1.6em; font-weight:bold;}
.missing .subtitle {display:none;}
.subtitle {font-size:1.1em;}
.tiddler .button {padding:0.2em 0.4em;}
.tagging {margin:0.5em 0.5em 0.5em 0; float:left; display:none;}
.isTag .tagging {display:block;}
.tagged {margin:0.5em; float:right;}
.tagging, .tagged {font-size:0.9em; padding:0.25em;}
.tagging ul, .tagged ul {list-style:none; margin:0.25em; padding:0;}
.tagClear {clear:both;}
.footer {font-size:.9em;}
.footer li {display:inline;}
.annotation {padding:0.5em; margin:0.5em;}
* html .viewer pre {width:99%; padding:0 0 1em 0;}
.viewer {line-height:1.4em; padding-top:0.5em;}
.viewer .button {margin:0 0.25em; padding:0 0.25em;}
.viewer blockquote {line-height:1.5em; padding-left:0.8em;margin-left:2.5em;}
.viewer ul, .viewer ol {margin-left:0.5em; padding-left:1.5em;}
.viewer table, table.twtable {border-collapse:collapse; margin:0.8em 1.0em;}
.viewer th, .viewer td, .viewer tr,.viewer caption,.twtable th, .twtable td, .twtable tr,.twtable caption {padding:3px;}
table.listView {font-size:0.85em; margin:0.8em 1.0em;}
table.listView th, table.listView td, table.listView tr {padding:0px 3px 0px 3px;}
.viewer pre {padding:0.5em; margin-left:0.5em; font-size:1.2em; line-height:1.4em; overflow:auto;}
.viewer code {font-size:1.2em; line-height:1.4em;}
.editor {font-size:1.1em;}
.editor input, .editor textarea {display:block; width:100%; font:inherit;}
.editorFooter {padding:0.25em 0; font-size:.9em;}
.editorFooter .button {padding-top:0px; padding-bottom:0px;}
.fieldsetFix {border:0; padding:0; margin:1px 0px;}
.sparkline {line-height:1em;}
.sparktick {outline:0;}
.zoomer {font-size:1.1em; position:absolute; overflow:hidden;}
.zoomer div {padding:1em;}
* html #backstage {width:99%;}
* html #backstageArea {width:99%;}
#backstageArea {display:none; position:relative; overflow: hidden; z-index:150; padding:0.3em 0.5em;}
#backstageToolbar {position:relative;}
#backstageArea a {font-weight:bold; margin-left:0.5em; padding:0.3em 0.5em;}
#backstageButton {display:none; position:absolute; z-index:175; top:0; right:0;}
#backstageButton a {padding:0.1em 0.4em; margin:0.1em;}
#backstage {position:relative; width:100%; z-index:50;}
#backstagePanel {display:none; z-index:100; position:absolute; width:90%; margin-left:3em; padding:1em;}
.backstagePanelFooter {padding-top:0.2em; float:right;}
.backstagePanelFooter a {padding:0.2em 0.4em;}
#backstageCloak {display:none; z-index:20; position:absolute; width:100%; height:100px;}
.whenBackstage {display:none;}
.backstageVisible .whenBackstage {display:block;}
/*}}}*/
/***
StyleSheet for use when a translation requires any css style changes.
This StyleSheet can be used directly by languages such as Chinese, Japanese and Korean which need larger font sizes.
***/
/*{{{*/
body {font-size:0.8em;}
#sidebarOptions {font-size:1.05em;}
#sidebarOptions a {font-style:normal;}
#sidebarOptions .sliderPanel {font-size:0.95em;}
.subtitle {font-size:0.8em;}
.viewer table.listView {font-size:0.95em;}
/*}}}*/
/*{{{*/
@media print {
#mainMenu, #sidebar, #messageArea, .toolbar, #backstageButton, #backstageArea {display: none !important;}
#displayArea {margin: 1em 1em 0em;}
noscript {display:none;} /* Fixes a feature in Firefox 1.5.0.2 where print preview displays the noscript content */
}
/*}}}*/
<<tabs txtMoreTab "Missing" "Missing tiddlers" TabMoreMissing "Orphans" "Orphaned tiddlers" TabMoreOrphans "Shadowed" "Shadowed tiddlers" TabMoreShadowed>>
/%
!info
|Name|ToggleRightSidebar|
|Source|http://www.TiddlyTools.com/#ToggleRightSidebar|
|Version|2.0.0|
|Author|Eric Shulman|
|License|http://www.TiddlyTools.com/#LegalStatements|
|~CoreVersion|2.1|
|Type|transclusion|
|Description|show/hide right sidebar (SideBarOptions)|
Usage
<<<
{{{
<<tiddler ToggleRightSidebar>>
<<tiddler ToggleRightSidebar with: label tooltip>>
}}}
Try it: <<tiddler ToggleRightSidebar##show
with: {{config.options.chkShowRightSidebar?'►':'◄'}}>>
<<<
Configuration:
<<<
{{{
config.options.chkShowRightSidebar (true)
config.options.txtToggleRightSideBarLabelShow (◄)
config.options.txtToggleRightSideBarLabelHide (►)
}}}
<<<
!end
!show
<<tiddler {{
var co=config.options;
if (co.chkShowRightSidebar===undefined) co.chkShowRightSidebar=true;
var sb=document.getElementById('sidebar');
var da=document.getElementById('displayArea');
if (sb) {
sb.style.display=co.chkShowRightSidebar?'block':'none';
da.style.marginRight=co.chkShowRightSidebar?'':'1em';
}
'';}}>><html><nowiki><a href='javascript:;' title="$2"
onmouseover="
this.href='javascript:void(eval(decodeURIComponent(%22(function(){try{('
+encodeURIComponent(encodeURIComponent(this.onclick))
+')()}catch(e){alert(e.description?e.description:e.toString())}})()%22)))';"
onclick="
var co=config.options;
var opt='chkShowRightSidebar';
var show=co[opt]=!co[opt];
var sb=document.getElementById('sidebar');
var da=document.getElementById('displayArea');
if (sb) {
sb.style.display=show?'block':'none';
da.style.marginRight=show?'':'1em';
}
saveOptionCookie(opt);
var labelShow=co.txtToggleRightSideBarLabelShow||'◄';
var labelHide=co.txtToggleRightSideBarLabelHide||'►';
if (this.innerHTML==labelShow||this.innerHTML==labelHide)
this.innerHTML=show?labelHide:labelShow;
this.title=(show?'hide':'show')+' right sidebar';
var sm=document.getElementById('storyMenu');
if (sm) config.refreshers.content(sm);
return false;
">$1</a></html>
!end
%/<<tiddler {{
var src='ToggleRightSidebar';
src+(tiddler&&tiddler.title==src?'##info':'##show');
}} with: {{
var co=config.options;
var labelShow=co.txtToggleRightSideBarLabelShow||'◄';
var labelHide=co.txtToggleRightSideBarLabelHide||'►';
'$1'!='$'+'1'?'$1':(co.chkShowRightSidebar?labelHide:labelShow);
}} {{
var tip=(config.options.chkShowRightSidebar?'hide':'show')+' right sidebar';
'$2'!='$'+'2'?'$2':tip;
}}>>
|~ViewToolbar|closeTiddler closeOthers +editTiddler > fields syncing permalink references jump|
|~EditToolbar|+saveTiddler -cancelTiddler deleteTiddler|
!!Programs
!!!!Statistics and Modelling
*[[The R Project for Statistical Computing|http://www.r-project.org]]
*[[R Commander|http://socserv.mcmaster.ca/jfox/Misc/Rcmdr/]] - A Basic Statistics GUI for R
*[[Statistica|http://www.statsoft.com]] - Statistical Package
*[[PAST|http://folk.uio.no/ohammer/past/]] - """PAlaeontological STatistics"""
*[[Resampling Stats|http://www.resample.com]] - Bootstrap and Permutation for excel
*[[PRIMER-E & Permanova|http://www.primer-e.com/]] - Multivariate statistics for ecologists
*[[Marti J. Anderson|http://www.stat.auckland.ac.nz/~mja/Programs.htm]] - Permanova and other free programs
*[[CANOCO|http://www.microcomputerpower.com/]] - Multivariate Statistics for Ecologists
*[[EcoSim|http://www.garyentsminger.com/ecosim/index.htm]] - Null modeling software for ecologists
*[[CurveExpert|http://www.curveexpert.net]] - Easy curve fitting system
*[[WZGrapher|http://www.freesoftwaretools.net/category/applications/portable-applications/maths/wzgrapher]] - Math function grapher
*[[STELLA|http://www.iseesystems.com/softwares/Education/StellaSoftware.aspx]] - Modeling & Simulation Software
*[[Vensim|http://www.vensim.com/]] - Simulation software
*[[Ecopath with Ecosim|http://www.ecopath.org]] - Free ecosystem modelling software suite
*[[Matlab|http://www.mathworks.com/products/matlab/]] and [[Octave|http://www.gnu.org/software/octave/]]
!!!!Bayesian Belief Network Tools
*[[Hugin|http://www.hugin.com]]
*[[Netica|http://www.norsys.com]]
*[[Genie|http://genie.sis.pitt.edu/]]
*[[BNT|http://www.cs.ubc.ca/~murphyk/Software/BNT/bnt.html]]
*[[BayesiaLab|http://www.bayesia.com/]]
*[[Analytica|http://www.lumina.com/]]
*[[AgenaRisk|http://www.agenarisk.com/]]
*[[JavaBayes|http://www.cs.cmu.edu/~javabayes/Home/]]
*[[MSBNx|http://research.microsoft.com/en-us/um/redmond/groups/adapt/msbnx/]]
*[[Tetrad|http://www.phil.cmu.edu/projects/tetrad/]]
*[[WinBugs|http://www.mrc-bsu.cam.ac.uk/bugs/]]
!!!!Image Analysis
*[[ImageJ|http://rsbweb.nih.gov/ij/]] - Image Processing and Analysis in Java
*[[CombineZM|http://www.hadleyweb.pwp.blueyonder.co.uk/CZM/combinezm.htm]] - Image stack processing program
*[[Engauge Digitizer|http://digitizer.sourceforge.net]] - Digitizing software
!!!!Other
*[[FreeMind|http://freemind.sourceforge.net/wiki/index.php/Main_Page]] - free mind mapping software
*[[Publish or Perish|http://www.harzing.com/pop.htm]]
*[[Zotero|http://www.zotero.org]] - Free Reference manager for [[Firefox|http://www.mozilla-europe.org/en/firefox/]]
*[[Acute-to-Chronic Estimation (ACE)|http://www.epa.gov/ceampubl/fchain/ace/index.html]] - """US-EPA""" Ecotoxicology Software
*[[AQUATOX|http://www.epa.gov/waterscience/models/aquatox/]] - Simulation model for aquatic systems
*[[Marxan|http://www.uq.edu.au/marxan/]] - Free conservation planning software
*[[C-Plan|http://www.uq.edu.au/ecology/index.html?page=101951]] - Conservation Planning System
<!--{{{-->
<!-- Original div class='toolbar' macro='toolbar [[ToolbarCommands::ViewToolbar]]'></div -->
<!-- Modified Toolbar -->
<div class='toolbar' macro="showWhen readOnly">
<!-- cut-down toolbar for web users -->
<div class='toolbar' macro='toolbar closeTiddler permalink'></div>
</div>
<div class='toolbar' macro="hideWhen readOnly">
<!-- regular toolbar for me -->
<div class='toolbar' macro='toolbar [[ToolbarCommands::ViewToolbar]]'></div>
</div>
<!-- Modified Toolbar -->
<div class='title' macro='view title'></div>
<div class='subtitle' macro="hideWhen readOnly">
<div class='subtitle'><span macro='view modifier link'></span>, <span macro='view modified date'></span> (<span macro='message views.wikified.createdPrompt'></span> <span macro='view created date'></span>)</div>
</div>
<div class='tagging' macro='tagging'></div>
<div macro="hideWhen readOnly"><div class='tagged' macro='tags'></div></div>
<div class='viewer' macro='view text wikified'></div>
<div class='tagClear'></div>
<!--}}}-->
To get started with this blank [[TiddlyWiki]], you'll need to modify the following tiddlers:
* [[SiteTitle]] & [[SiteSubtitle]]: The title and subtitle of the site, as shown above (after saving, they will also appear in the browser title bar)
* [[MainMenu]]: The menu (usually on the left)
* [[DefaultTiddlers]]: Contains the names of the tiddlers that you want to appear when the TiddlyWiki is opened
* <<tiddler ToggleRightSidebar with: "Toggle Right Side Bar">>
You'll also need to enter your username for signing your edits: <<option txtUserName>>
config.macros.gadget = {};
config.macros.gadget .handler = function(place,macroName,params, wikifier, paramString) {
var elem = createTiddlyElement(place,"iframe",null,"greeting","");
var p = paramString.parseParams(null, null, true);
elem.src= "http://www.gmodules.com/ig/ifr?url=" + params[0] + "&" + getParam(p,"prefs","");
elem.height = getParam(p,"height","200");
elem.width= getParam(p,"width","300");
elem.style.border= getParam(p,"border","1");
place.appendChild(elem);
};
if(config.options.txtUserName != "gusmao") {
config.options.chkShowRightSidebar=false;
config.options.chkSinglePageMode= true;
readOnly = true;
showBackstage = false;
}
config.messages.tiddlerLinkTooltip = "";
config.options.chkAnimate = false;